Spin echo SS-PARSE: A PARSE MRI method to estimate R2, R2' and frequency in a single shot

2010 2010

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Abstract (summary)

Rapid and accurate mapping of relaxation rates applies to a number of neuroimaging and functional magnetic resonance imaging (fMRI) studies. Previously developed relaxation rate mapping methods are based mostly on non-linear fitting of intensity images. For the first time, this study developed an ultrafast and direct transverse relaxation rate mapping technique, Spin Echo Single-Shot Parameter Assessment by Retrieval from Single Encoding (SE-SS-PARSE). Four useful imaging parameters, local transverse magnetization magnitude (M xy0), frequency (f), reversible and irreversible transverse relaxation rate (R2' and R2), can be estimated using an iterative searching algorithm simultaneously and quantitatively. In addition, the SE-SS-PARSE technique is free of geometric errors and blurring artifacts that commonly occur in the other SS techniques, such as echo planar imaging (EPI).

Specifically, this work developed the signal model of SE-SS-PARSE and tested this technique with computer simulations, experimental phantoms and biological samples. In simulations, even at a noise level with low signal-to-noise ratio (SNR) of 20dB, SE-SS-PARSE is able to generate accurate local magnetization parameter maps subject to statistical comparison with actual parameter values. After successful testing with a numerical phantom, the SE-SS-PARSE technique was performed on a realistic four-tube phantom, which was designed to produce in-vivo-like and different R2 and R2' values in each tube. The estimated relaxation rates from SE-SS-PARSE were highly correlated with relaxation rates computed from slower “gold standard” conventional MRI methods (correlation coefficients r1=0.9636 for R2', r2=0.9788 for R2). The ultrafast SE-SS-PARSE technique was also compared with a widely used T2-weighted imaging MRI technique, fast spin echo (FSE), in mapping R2 values. Four-tube phantom studies indicate that SE-SS-PARSE produces results with accuracy equivalent to FSE, but with a much shorter acquisition time. In addition, biological sample studies show that SE-SS-PARSE with fat saturation pulse produces more accurate R2 estimates than used without fat saturation when fat is present. In conclusion, SE-SS-PARSE is an ultrafast MRI method that can produce reliable R2 and R2' mapping. It is expected that SE-SS-PARSE will find important applications in neuroimaging and fMRI studies, especially in recording rapidly changing physiological phenomena.

Keywords: Rapid relaxation rate mapping, PARSE MRI, Single-shot, Spin Echo.

Indexing (details)

Biomedical engineering;
Medical imaging
0541: Biomedical engineering
0574: Medical imaging
Identifier / keyword
Health and environmental sciences; Applied sciences; PARSE MRI; Rapid relaxation rate mapping; Single-shot; Spin echo
Spin echo SS-PARSE: A PARSE MRI method to estimate R2, R2' and frequency in a single shot
Li, Ningzhi
Number of pages
Publication year
Degree date
School code
DAI-B 72/03, Dissertation Abstracts International
Place of publication
Ann Arbor
Country of publication
United States
Twieg, Donald B.
Committee member
Dobbins, Allan C.; Elgavish, Rotem A.; Reeves, Stanley J.; Stokely, Ernest M.; Yao, Xincheng
The University of Alabama at Birmingham
Biomedical Engineering
University location
United States -- Alabama
Source type
Dissertations & Theses
Document type
Dissertation/thesis number
ProQuest document ID
Database copyright ProQuest LLC; ProQuest does not claim copyright in the individual underlying works.
Document URL
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